Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrn3B2RS91 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rrn3B2RS91 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.74■□□□□ 0.43
Rrn3B2RS91 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.74■□□□□ 0.43
Rrn3B2RS91 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Tgds-204ENSMUST00000228543 1594 ntBASIC17.74■□□□□ 0.43
Rrn3B2RS91 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rrn3B2RS91 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rrn3B2RS91 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rrn3B2RS91 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.72■□□□□ 0.43
Rrn3B2RS91 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rrn3B2RS91 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Gm10418-201ENSMUST00000100943 576 ntBASIC17.71■□□□□ 0.43
Rrn3B2RS91 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rrn3B2RS91 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rrn3B2RS91 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rrn3B2RS91 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rrn3B2RS91 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rrn3B2RS91 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rrn3B2RS91 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rrn3B2RS91 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.7■□□□□ 0.42
Rrn3B2RS91 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.7■□□□□ 0.42
Rrn3B2RS91 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rrn3B2RS91 Gm10698-201ENSMUST00000182663 604 ntBASIC17.7■□□□□ 0.42
Rrn3B2RS91 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.7■□□□□ 0.42
Rrn3B2RS91 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rrn3B2RS91 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.7■□□□□ 0.42
Rrn3B2RS91 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrn3B2RS91 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrn3B2RS91 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rrn3B2RS91 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrn3B2RS91 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rrn3B2RS91 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrn3B2RS91 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrn3B2RS91 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.69■□□□□ 0.42
Rrn3B2RS91 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.69■□□□□ 0.42
Rrn3B2RS91 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrn3B2RS91 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rrn3B2RS91 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rrn3B2RS91 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Rrn3B2RS91 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms