Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.36□□□□□ -0.27
Col6a5A6H584 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Col6a5A6H584 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col6a5A6H584 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.36□□□□□ -0.27
Col6a5A6H584 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col6a5A6H584 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Col6a5A6H584 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a5A6H584 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col6a5A6H584 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm15165-201ENSMUST00000118140 502 ntBASIC13.35□□□□□ -0.27
Col6a5A6H584 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm6376-201ENSMUST00000209407 580 ntBASIC13.35□□□□□ -0.27
Col6a5A6H584 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm12644-201ENSMUST00000119935 606 ntBASIC13.35□□□□□ -0.27
Col6a5A6H584 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a5A6H584 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a5A6H584 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.34□□□□□ -0.27
Col6a5A6H584 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Col6a5A6H584 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a5A6H584 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a5A6H584 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a5A6H584 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a5A6H584 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col6a5A6H584 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a5A6H584 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.33□□□□□ -0.28
Col6a5A6H584 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a5A6H584 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.33□□□□□ -0.28
Col6a5A6H584 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a5A6H584 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a5A6H584 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.32□□□□□ -0.28
Col6a5A6H584 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col6a5A6H584 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col6a5A6H584 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Gm15372-201ENSMUST00000120729 834 ntBASIC13.32□□□□□ -0.28
Col6a5A6H584 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col6a5A6H584 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a5A6H584 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a5A6H584 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col6a5A6H584 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col6a5A6H584 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col6a5A6H584 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.31□□□□□ -0.28
Col6a5A6H584 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms