Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.38□□□□□ -0.11
Chd6A3KFM7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.37□□□□□ -0.11
Chd6A3KFM7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.37□□□□□ -0.11
Chd6A3KFM7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Mir2861-201ENSMUST00000175539 82 ntBASIC14.37□□□□□ -0.11
Chd6A3KFM7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd6A3KFM7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.36□□□□□ -0.11
Chd6A3KFM7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.36□□□□□ -0.11
Chd6A3KFM7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chd6A3KFM7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chd6A3KFM7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.36□□□□□ -0.11
Chd6A3KFM7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.35□□□□□ -0.11
Chd6A3KFM7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.35□□□□□ -0.11
Chd6A3KFM7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd6A3KFM7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Gm15653-201ENSMUST00000119247 907 ntBASIC14.34□□□□□ -0.11
Chd6A3KFM7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Gm6376-201ENSMUST00000209407 580 ntBASIC14.34□□□□□ -0.11
Chd6A3KFM7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd6A3KFM7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.34□□□□□ -0.11
Chd6A3KFM7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chd6A3KFM7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd6A3KFM7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms