Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Gm9731-201ENSMUST00000209480 747 ntBASIC17.4■□□□□ 0.38
Chd7A2AJK6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd7A2AJK6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd7A2AJK6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.39■□□□□ 0.37
Chd7A2AJK6 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.39■□□□□ 0.37
Chd7A2AJK6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd7A2AJK6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Gm37722-201ENSMUST00000193757 208 ntBASIC17.38■□□□□ 0.37
Chd7A2AJK6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.38■□□□□ 0.37
Chd7A2AJK6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.38■□□□□ 0.37
Chd7A2AJK6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chd7A2AJK6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd7A2AJK6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.37■□□□□ 0.37
Chd7A2AJK6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.37■□□□□ 0.37
Chd7A2AJK6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.37■□□□□ 0.37
Chd7A2AJK6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.37■□□□□ 0.37
Chd7A2AJK6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd7A2AJK6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Gm11594-201ENSMUST00000122313 162 ntBASIC17.36■□□□□ 0.37
Chd7A2AJK6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.36■□□□□ 0.37
Chd7A2AJK6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.36■□□□□ 0.37
Chd7A2AJK6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.36■□□□□ 0.37
Chd7A2AJK6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd7A2AJK6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd7A2AJK6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd7A2AJK6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.35■□□□□ 0.37
Chd7A2AJK6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Gm10418-201ENSMUST00000100943 576 ntBASIC17.35■□□□□ 0.37
Chd7A2AJK6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Gm11452-201ENSMUST00000122376 690 ntBASIC17.35■□□□□ 0.37
Chd7A2AJK6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd7A2AJK6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.35■□□□□ 0.37
Chd7A2AJK6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Chd7A2AJK6 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.34■□□□□ 0.37
Chd7A2AJK6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd7A2AJK6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms