Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IsxA1A546 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IsxA1A546 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IsxA1A546 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IsxA1A546 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IsxA1A546 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IsxA1A546 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
IsxA1A546 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IsxA1A546 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IsxA1A546 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IsxA1A546 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.4■□□□□ 0.22
IsxA1A546 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.4■□□□□ 0.22
IsxA1A546 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IsxA1A546 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
IsxA1A546 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
IsxA1A546 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.39■□□□□ 0.21
IsxA1A546 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Gm8493-201ENSMUST00000196881 489 ntBASIC16.39■□□□□ 0.21
IsxA1A546 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
IsxA1A546 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
IsxA1A546 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IsxA1A546 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IsxA1A546 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IsxA1A546 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.39■□□□□ 0.21
IsxA1A546 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
IsxA1A546 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.38■□□□□ 0.21
IsxA1A546 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
IsxA1A546 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
IsxA1A546 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.38■□□□□ 0.21
IsxA1A546 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.38■□□□□ 0.21
IsxA1A546 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IsxA1A546 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
IsxA1A546 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.37■□□□□ 0.21
IsxA1A546 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
IsxA1A546 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
IsxA1A546 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.37■□□□□ 0.21
IsxA1A546 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
IsxA1A546 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
IsxA1A546 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.36■□□□□ 0.21
IsxA1A546 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms