Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Mtag2-201ENSMUST00000058665 714 ntBASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm20049-201ENSMUST00000219950 730 ntBASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-2A0A140T8N6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm27275-201ENSMUST00000184318 272 ntBASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-2A0A140T8N6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-2A0A140T8N6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-2A0A140T8N6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-2A0A140T8N6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-2A0A140T8N6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-2A0A140T8N6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-2A0A140T8N6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv13-2A0A140T8N6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm11249-201ENSMUST00000117071 859 ntBASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv13-2A0A140T8N6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms