Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm43060-201ENSMUST00000200621 289 ntBASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Fcho2-208ENSMUST00000224992 2964 ntBASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm37805-201ENSMUST00000192612 1094 ntBASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Igkv1-88A0A140T8N1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Igkv1-88A0A140T8N1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Igkv1-88A0A140T8N1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms