Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Frmpd3A0A140LIW3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Gm18206-201ENSMUST00000207027 926 ntBASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Frmpd3A0A140LIW3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Frmpd3A0A140LIW3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Gm12895-201ENSMUST00000122214 226 ntBASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Frmpd3A0A140LIW3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Gm2651-201ENSMUST00000203560 838 ntBASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Frmpd3A0A140LIW3 Gm11452-201ENSMUST00000122376 690 ntBASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Frmpd3A0A140LIW3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Frmpd3A0A140LIW3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Frmpd3A0A140LIW3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Frmpd3A0A140LIW3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Frmpd3A0A140LIW3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Frmpd3A0A140LIW3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Frmpd3A0A140LIW3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21■□□□□ 0.95
Frmpd3A0A140LIW3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Frmpd3A0A140LIW3 Gm37935-201ENSMUST00000192012 982 ntBASIC21■□□□□ 0.95
Frmpd3A0A140LIW3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms