Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29791-202ENSMUST00000207888 369 ntBASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42569-201ENSMUST00000200539 472 ntBASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir8112-201ENSMUST00000184382 131 ntBASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.46■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Flg-201ENSMUST00000050758 1488 ntBASIC15.46■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10418-201ENSMUST00000100943 576 ntBASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13148-201ENSMUST00000118892 745 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms