Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav23A0A0G2JG17 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav23A0A0G2JG17 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav23A0A0G2JG17 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.46□□□□□ -0.1
Trav23A0A0G2JG17 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav23A0A0G2JG17 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav23A0A0G2JG17 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Dio3-201ENSMUST00000097228 1449 ntBASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav23A0A0G2JG17 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Flg-201ENSMUST00000050758 1488 ntBASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav23A0A0G2JG17 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav23A0A0G2JG17 Gm13168-201ENSMUST00000121771 632 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms