Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav7-1A0A0G2JEV5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7-1A0A0G2JEV5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7-1A0A0G2JEV5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7-1A0A0G2JEV5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7-1A0A0G2JEV5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Gm7514-201ENSMUST00000209475 934 ntBASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Gm10493-201ENSMUST00000097270 612 ntBASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7-1A0A0G2JEV5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7-1A0A0G2JEV5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7-1A0A0G2JEV5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms