Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-1A0A0G2JEU8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.77□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm15378-201ENSMUST00000121894 207 ntBASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm6576-201ENSMUST00000169678 883 ntBASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-1A0A0G2JEU8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms