Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm7290-201ENSMUST00000104990 617 ntBASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm12918-201ENSMUST00000120234 636 ntBASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm15710-201ENSMUST00000121821 636 ntBASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm5075-201ENSMUST00000196916 622 ntBASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav21-dv12A0A075B6C4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Trav21-dv12A0A075B6C4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav21-dv12A0A075B6C4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav21-dv12A0A075B6C4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav21-dv12A0A075B6C4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms