Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-5A0A075B6B9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-5A0A075B6B9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav6d-5A0A075B6B9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-5A0A075B6B9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-5A0A075B6B9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-5A0A075B6B9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-5A0A075B6B9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-5A0A075B6B9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-5A0A075B6B9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-5A0A075B6B9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Mir8112-201ENSMUST00000184382 131 ntBASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-5A0A075B6B9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms