Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6n-6A0A075B6B2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6n-6A0A075B6B2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Reep4-203ENSMUST00000226563 1444 ntBASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6n-6A0A075B6B2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trav6n-6A0A075B6B2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6n-6A0A075B6B2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6n-6A0A075B6B2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6n-6A0A075B6B2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms