Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav13-2A0A075B649 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-2A0A075B649 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav13-2A0A075B649 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav13-2A0A075B649 Gm15635-204ENSMUST00000208024 2539 ntBASIC11.9□□□□□ -0.5
Trav13-2A0A075B649 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13-2A0A075B649 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.9□□□□□ -0.51
Trav13-2A0A075B649 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 AC107452.1-201ENSMUST00000227963 481 ntBASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11.89□□□□□ -0.51
Trav13-2A0A075B649 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav13-2A0A075B649 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13-2A0A075B649 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13-2A0A075B649 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms