Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Gm6576-201ENSMUST00000169678 883 ntBASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.56□□□□□ -0.4
Trav13-1A0A075B644 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Zfp783-201ENSMUST00000095946 670 ntBASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13-1A0A075B644 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Gm10698-201ENSMUST00000182663 604 ntBASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Mtag2-201ENSMUST00000058665 714 ntBASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trav13-1A0A075B644 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav13-1A0A075B644 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms