Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Gm10698-201ENSMUST00000182663 604 ntBASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Mir7071-201ENSMUST00000184847 69 ntBASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-1A0A075B606 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-1A0A075B606 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Zfp783-201ENSMUST00000095946 670 ntBASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-1A0A075B606 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Mtag2-201ENSMUST00000058665 714 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms