Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5-1A0A075B5Z7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm5417-201ENSMUST00000079706 384 ntBASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5-1A0A075B5Z7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm13401-201ENSMUST00000117074 291 ntBASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav5-1A0A075B5Z7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5-1A0A075B5Z7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm3375-201ENSMUST00000203929 796 ntBASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms