Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Gm23927-201ENSMUST00000082466 215 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Snora52-201ENSMUST00000082732 137 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Gm25140-201ENSMUST00000083254 140 ntBASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upk3aQ9JKX8 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm24578-201ENSMUST00000103970 129 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm7840-201ENSMUST00000122086 533 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm25290-201ENSMUST00000122796 144 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm29332-201ENSMUST00000190829 227 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm43350-201ENSMUST00000196382 711 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm44003-201ENSMUST00000203024 490 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm44816-201ENSMUST00000206666 477 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm2607-201ENSMUST00000212389 627 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm23300-201ENSMUST00000082712 125 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.62□□□□□ -1.67
Upk3aQ9JKX8 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm7312-201ENSMUST00000118798 469 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm12444-201ENSMUST00000121512 877 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm12893-201ENSMUST00000121732 275 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm24628-201ENSMUST00000122761 289 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm17152-201ENSMUST00000172430 535 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm28976-201ENSMUST00000188070 144 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm44485-201ENSMUST00000199569 137 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm44237-201ENSMUST00000205183 936 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm29785-201ENSMUST00000217033 383 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Upk3aQ9JKX8 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms