Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.6□□□□□ -1.51
Trim8Q99PJ2 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.6□□□□□ -1.51
Trim8Q99PJ2 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.6□□□□□ -1.51
Trim8Q99PJ2 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim8Q99PJ2 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm22953-201ENSMUST00000116724 101 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm13641-201ENSMUST00000117993 473 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm11719-201ENSMUST00000119399 351 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm11404-201ENSMUST00000120872 494 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm26410-201ENSMUST00000157670 261 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm8256-201ENSMUST00000169178 453 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm25065-201ENSMUST00000177914 132 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm17048-201ENSMUST00000179266 847 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm25891-201ENSMUST00000180050 132 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm27942-201ENSMUST00000184669 101 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm38261-201ENSMUST00000192608 316 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm36986-201ENSMUST00000195320 353 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 AC144628.1-201ENSMUST00000227943 466 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm16415-201ENSMUST00000080097 489 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.59□□□□□ -1.51
Trim8Q99PJ2 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim8Q99PJ2 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.59□□□□□ -1.52
Trim8Q99PJ2 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Trim8Q99PJ2 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim8Q99PJ2 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm24709-201ENSMUST00000104123 132 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms