Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdh23Q99PF4 Gm7380-201ENSMUST00000211599 466 ntBASIC4.57□□□□□ -1.68
Cdh23Q99PF4 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdh23Q99PF4 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdh23Q99PF4 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdh23Q99PF4 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm24788-201ENSMUST00000104283 156 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm15014-201ENSMUST00000120742 258 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Mir6917-201ENSMUST00000184111 61 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Mir6345-201ENSMUST00000184286 128 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm18120-201ENSMUST00000220079 511 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm25177-201ENSMUST00000122634 117 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm25667-201ENSMUST00000157701 275 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm29428-201ENSMUST00000190086 409 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm25977-201ENSMUST00000158697 85 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.56□□□□□ -1.68
Cdh23Q99PF4 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm12335-201ENSMUST00000119738 327 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm5379-201ENSMUST00000120973 826 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm9003-201ENSMUST00000121810 482 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm36964-201ENSMUST00000191876 198 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm42453-201ENSMUST00000200477 409 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm6065-201ENSMUST00000081336 492 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm6043-201ENSMUST00000099961 492 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm24281-201ENSMUST00000104234 136 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm12654-201ENSMUST00000120387 587 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm5391-201ENSMUST00000121155 613 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm29045-201ENSMUST00000187278 698 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdh23Q99PF4 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms