Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm15331-201ENSMUST00000120225 385 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm12181-201ENSMUST00000121448 531 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm23465-201ENSMUST00000157134 262 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm4134-201ENSMUST00000173244 563 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm3605-201ENSMUST00000185858 440 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm28740-201ENSMUST00000186142 215 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm29335-201ENSMUST00000188361 459 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm28843-201ENSMUST00000189198 678 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm29546-201ENSMUST00000191171 678 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm8911-201ENSMUST00000213986 652 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm18997-201ENSMUST00000216353 822 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm22300-201ENSMUST00000082661 126 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm25699-201ENSMUST00000082896 167 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.62□□□□□ -1.35
Clp1Q99LI9 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Clp1Q99LI9 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm15096-201ENSMUST00000121918 878 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm24731-201ENSMUST00000158227 131 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm25906-201ENSMUST00000158489 126 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm23149-201ENSMUST00000158837 230 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm9613-201ENSMUST00000171662 196 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm25412-201ENSMUST00000180258 107 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Mir6541-201ENSMUST00000183649 110 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm43114-201ENSMUST00000198298 343 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm36382-201ENSMUST00000198892 541 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm43505-201ENSMUST00000200579 139 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm5306-201ENSMUST00000203325 757 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm17988-201ENSMUST00000208796 535 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 AC161758.1-201ENSMUST00000226123 310 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.61□□□□□ -1.35
Clp1Q99LI9 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Clp1Q99LI9 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms