Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm23274-201ENSMUST00000104056 130 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm4853-201ENSMUST00000119359 394 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm22958-201ENSMUST00000122512 184 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm22084-201ENSMUST00000157585 105 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm24685-201ENSMUST00000157764 285 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm24395-201ENSMUST00000158139 125 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm10319-202ENSMUST00000159439 846 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm37908-201ENSMUST00000195828 470 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm42983-201ENSMUST00000199879 815 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Mir133b-201ENSMUST00000083546 119 ntBASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Lsm1Q8VC85 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Lsm1Q8VC85 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm13771-201ENSMUST00000117988 238 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm11481-201ENSMUST00000120069 255 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm13488-201ENSMUST00000120419 179 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm13132-201ENSMUST00000121194 472 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm24675-201ENSMUST00000158757 259 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm29475-201ENSMUST00000190767 312 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm10292-202ENSMUST00000193165 585 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm43408-201ENSMUST00000198263 440 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm9038-201ENSMUST00000203400 604 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm2099-201ENSMUST00000220979 412 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm19189-201ENSMUST00000221689 754 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm5215-201ENSMUST00000054380 405 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm25187-201ENSMUST00000083906 133 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.65□□□□□ -1.67
Lsm1Q8VC85 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Lsm1Q8VC85 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms