Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37996-201ENSMUST00000191859 367 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Gm37908-201ENSMUST00000195828 470 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Gm42830-201ENSMUST00000196642 313 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Gm43444-201ENSMUST00000198123 291 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Gm19880-201ENSMUST00000207731 318 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 AC132237.2-201ENSMUST00000221702 1209 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 AC162934.3-201ENSMUST00000223015 841 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 AC154548.1-201ENSMUST00000225844 3838 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 AC132918.1-201ENSMUST00000227877 925 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Gm42583-201ENSMUST00000202678 6700 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.06□□□□□ -1.44
Ccdc9Q8VC31 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm44860-201ENSMUST00000208473 2346 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm38269-201ENSMUST00000194549 3298 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm15279-201ENSMUST00000155593 288 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm22599-201ENSMUST00000157597 132 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm24435-201ENSMUST00000157886 110 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm22968-201ENSMUST00000157955 118 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm17711-201ENSMUST00000172028 237 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Mir5125-201ENSMUST00000175240 79 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm28614-201ENSMUST00000186483 458 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm20915-201ENSMUST00000191575 663 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm34768-201ENSMUST00000193884 565 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm43774-201ENSMUST00000196327 878 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm8861-201ENSMUST00000196346 832 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm44239-201ENSMUST00000204228 271 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm8556-201ENSMUST00000210437 664 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 CT009713.4-201ENSMUST00000224246 272 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc9Q8VC31 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Gm43658-201ENSMUST00000202348 4176 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 AC126439.1-201ENSMUST00000226772 2104 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Gm25414-201ENSMUST00000101814 107 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Gm11105-201ENSMUST00000112781 478 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Gm14107-201ENSMUST00000117774 330 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Gm12105-201ENSMUST00000120846 779 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC6.04□□□□□ -1.44
Ccdc9Q8VC31 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms