Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm13808-201ENSMUST00000121353 184 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm25048-201ENSMUST00000158598 91 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm22116-201ENSMUST00000158791 141 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm28614-201ENSMUST00000186483 458 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm8861-201ENSMUST00000196346 832 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm29815-201ENSMUST00000202418 178 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm8703-201ENSMUST00000203793 730 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm44849-201ENSMUST00000207595 484 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm14082-201ENSMUST00000118582 801 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm11631-201ENSMUST00000119220 156 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm13213-201ENSMUST00000119668 474 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm13460-201ENSMUST00000121274 353 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm9687-201ENSMUST00000189312 602 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm28769-201ENSMUST00000190176 615 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm9134-201ENSMUST00000193186 551 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm29781-201ENSMUST00000203862 478 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm34224-201ENSMUST00000204606 364 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm18791-201ENSMUST00000204611 726 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm22220-201ENSMUST00000082671 149 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nup88Q8CEC0 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm8129-201ENSMUST00000118230 213 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm15828-201ENSMUST00000119911 522 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm13149-201ENSMUST00000122071 339 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm17790-201ENSMUST00000191545 1228 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm37684-201ENSMUST00000192779 355 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm18747-201ENSMUST00000198129 648 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm24207-201ENSMUST00000082781 108 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms