Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm6650-201ENSMUST00000166710 614 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm11394-201ENSMUST00000181421 517 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm8703-201ENSMUST00000203793 730 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm26330-201ENSMUST00000082817 104 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Snora64-201ENSMUST00000104521 134 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm5924-201ENSMUST00000132554 871 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm23318-201ENSMUST00000158000 108 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm27976-201ENSMUST00000183635 162 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm19774-201ENSMUST00000190667 114 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm8823-201ENSMUST00000193158 433 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.2□□□□□ -1.74
Col6a6Q8C6K9 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm37902-201ENSMUST00000192839 1683 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm14107-201ENSMUST00000117774 330 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm13132-201ENSMUST00000121194 472 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm14500-201ENSMUST00000121647 113 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm37492-201ENSMUST00000191948 376 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm21461-201ENSMUST00000200382 863 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm23464-201ENSMUST00000083145 147 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm25140-201ENSMUST00000083254 140 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm22473-201ENSMUST00000104114 132 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm13249-201ENSMUST00000177803 345 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm13144-201ENSMUST00000179385 345 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Mir7658-201ENSMUST00000184043 57 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Mir6537-201ENSMUST00000184150 110 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm18442-201ENSMUST00000220925 639 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.19□□□□□ -1.74
Col6a6Q8C6K9 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a6Q8C6K9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms