Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm6057-201ENSMUST00000195927 314 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm8454-201ENSMUST00000196980 811 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Mir129-2-201ENSMUST00000083577 90 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm25859-201ENSMUST00000083710 91 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm44695-201ENSMUST00000205567 1631 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm24338-201ENSMUST00000104205 127 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm12937-201ENSMUST00000118333 448 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm11972-201ENSMUST00000118514 389 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm13220-201ENSMUST00000121535 508 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm12438-201ENSMUST00000122034 336 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm22383-201ENSMUST00000158188 327 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm22261-201ENSMUST00000158691 324 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm18006-201ENSMUST00000177411 662 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm28257-201ENSMUST00000185244 463 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm43354-201ENSMUST00000196862 346 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm23011-202ENSMUST00000197855 275 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm2602-201ENSMUST00000202112 571 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm45438-201ENSMUST00000210242 564 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm5649-201ENSMUST00000217918 951 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Cma2-202ENSMUST00000228263 857 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm23406-201ENSMUST00000082537 122 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm10356-201ENSMUST00000097152 1258 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Gm18360-201ENSMUST00000173327 1524 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim47Q8C0E3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.28
Trim47Q8C0E3 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.09□□□□□ -1.28
Trim47Q8C0E3 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC7.09□□□□□ -1.28
Trim47Q8C0E3 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim47Q8C0E3 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Trim47Q8C0E3 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.09□□□□□ -1.28
Trim47Q8C0E3 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim47Q8C0E3 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.09□□□□□ -1.28
Trim47Q8C0E3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm14988-201ENSMUST00000117224 1548 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
Trim47Q8C0E3 Gm26289-201ENSMUST00000104169 131 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms