Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm25942-201ENSMUST00000180080 110 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm27602-201ENSMUST00000183861 111 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm28973-201ENSMUST00000189310 613 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm37243-201ENSMUST00000193407 595 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm43315-201ENSMUST00000198120 313 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm44162-201ENSMUST00000203543 544 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm44060-201ENSMUST00000204440 410 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm45312-201ENSMUST00000210566 311 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm10540-201ENSMUST00000097581 276 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh19Q80TF3 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm15382-201ENSMUST00000118011 537 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm13245-201ENSMUST00000119646 260 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm26410-201ENSMUST00000157670 261 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm23068-201ENSMUST00000158239 293 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm22076-201ENSMUST00000158601 84 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm23945-201ENSMUST00000179609 92 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Trbv9-201ENSMUST00000194494 290 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm9227-201ENSMUST00000194733 566 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm44055-201ENSMUST00000204376 247 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm45514-201ENSMUST00000211531 689 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm7692-201ENSMUST00000213534 409 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC174082.1-201ENSMUST00000221106 307 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm25133-201ENSMUST00000082647 130 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm24405-201ENSMUST00000083033 167 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.22□□□□□ -1.41
Pcdh19Q80TF3 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms