Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm17048-201ENSMUST00000179266 847 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm27313-201ENSMUST00000183500 142 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Mir6411-201ENSMUST00000183556 108 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Mir496b-201ENSMUST00000184935 113 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm19280-201ENSMUST00000190191 205 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37828-201ENSMUST00000192496 432 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37135-201ENSMUST00000192652 534 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37523-201ENSMUST00000194901 412 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm36986-201ENSMUST00000195320 353 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm44281-201ENSMUST00000203090 166 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm44254-201ENSMUST00000204184 322 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18805-201ENSMUST00000206872 655 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18103-201ENSMUST00000216621 779 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24460-201ENSMUST00000082731 106 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23452-201ENSMUST00000083327 107 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.22□□□□□ -1.41
Sh3rf1Q69ZI1 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.21□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12077-201ENSMUST00000117049 364 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm14885-201ENSMUST00000117969 496 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15126-201ENSMUST00000118631 833 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15312-201ENSMUST00000118827 271 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15309-201ENSMUST00000121644 240 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm26255-201ENSMUST00000122492 103 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm16331-201ENSMUST00000144274 498 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm8338-201ENSMUST00000163928 363 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm28066-201ENSMUST00000188657 472 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm34768-201ENSMUST00000193884 565 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm44221-201ENSMUST00000203552 388 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm5649-201ENSMUST00000217918 951 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm18704-201ENSMUST00000219736 446 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 AC154600.1-201ENSMUST00000226480 714 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sh3rf1Q69ZI1 Gm26072-201ENSMUST00000083135 107 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms