Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm12332-201ENSMUST00000121397 922 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm25572-201ENSMUST00000157527 172 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm8498-201ENSMUST00000188227 974 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Mir338-201ENSMUST00000083666 98 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm17137-201ENSMUST00000164106 4371 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm22269-201ENSMUST00000104002 130 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm26367-201ENSMUST00000104165 132 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm23709-201ENSMUST00000104364 130 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm8051-201ENSMUST00000120464 466 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm13092-201ENSMUST00000136346 260 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Mir6408-201ENSMUST00000183643 91 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm27773-201ENSMUST00000184087 78 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm19201-201ENSMUST00000210127 778 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Gm10042-201ENSMUST00000079884 78 ntBASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Shank3Q4ACU6 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gm22498-201ENSMUST00000104497 86 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gm11631-201ENSMUST00000119220 156 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gm24553-201ENSMUST00000158653 131 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gm4045-201ENSMUST00000204076 310 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gm46190-201ENSMUST00000219650 427 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Shank3Q4ACU6 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm23175-201ENSMUST00000104371 132 ntBASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm10444-201ENSMUST00000126708 148 ntBASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm5374-202ENSMUST00000222910 314 ntBASIC5.86□□□□□ -1.47
Shank3Q4ACU6 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shank3Q4ACU6 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Gm5924-201ENSMUST00000132554 871 ntBASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Gm22536-201ENSMUST00000158171 134 ntBASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Mir129b-201ENSMUST00000197461 65 ntBASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Gm43814-201ENSMUST00000197851 413 ntBASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shank3Q4ACU6 Gm17780-201ENSMUST00000207142 612 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms