Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Nkx3-1P97436 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.22□□□□□ -1.73
Nkx3-1P97436 CT030159.1-201ENSMUST00000221580 2261 ntBASIC4.21□□□□□ -1.73
Nkx3-1P97436 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.21□□□□□ -1.73
Nkx3-1P97436 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Nkx3-1P97436 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Nkx3-1P97436 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.21□□□□□ -1.73
Nkx3-1P97436 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.21□□□□□ -1.73
Nkx3-1P97436 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.73
Nkx3-1P97436 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm13172-201ENSMUST00000118685 256 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm12186-201ENSMUST00000119050 945 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm15206-201ENSMUST00000119143 454 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm13162-201ENSMUST00000121481 454 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm23906-201ENSMUST00000157573 128 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm45651-201ENSMUST00000210857 335 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm46327-201ENSMUST00000218240 365 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.21□□□□□ -1.74
Nkx3-1P97436 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nkx3-1P97436 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Mir92b-201ENSMUST00000102300 83 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm24125-201ENSMUST00000104105 137 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm16082-201ENSMUST00000115992 377 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm12583-201ENSMUST00000120677 853 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm13000-201ENSMUST00000120937 496 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm25290-201ENSMUST00000122796 144 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm27564-201ENSMUST00000185196 96 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm28660-201ENSMUST00000186496 253 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm37961-201ENSMUST00000192729 299 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm37167-201ENSMUST00000194946 396 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm44237-201ENSMUST00000205183 936 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 AC153936.1-201ENSMUST00000219874 395 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gm8288-201ENSMUST00000223406 593 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.2□□□□□ -1.74
Nkx3-1P97436 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nkx3-1P97436 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms