Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm14368-201ENSMUST00000145305 415 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm10319-202ENSMUST00000159439 846 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdh11P55288 Gm20397-201ENSMUST00000174520 362 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Mir3090-201ENSMUST00000175597 87 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Cdh11P55288 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh11P55288 Mir7222-201ENSMUST00000183740 75 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm29596-201ENSMUST00000185710 385 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Cdh11P55288 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.64□□□□□ -1.67
Cdh11P55288 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh11P55288 Gm19029-201ENSMUST00000189923 564 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18547-201ENSMUST00000192439 811 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm29813-201ENSMUST00000195856 447 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm44456-201ENSMUST00000196554 89 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm42694-201ENSMUST00000196951 358 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh11P55288 Gm42579-201ENSMUST00000200512 734 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm44615-201ENSMUST00000206548 358 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18468-201ENSMUST00000207321 369 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18470-201ENSMUST00000207467 420 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18465-201ENSMUST00000207468 369 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18464-201ENSMUST00000207803 420 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18458-201ENSMUST00000207908 369 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18461-201ENSMUST00000208421 420 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm45157-201ENSMUST00000208729 401 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18541-201ENSMUST00000215935 538 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm18904-201ENSMUST00000218756 329 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.64□□□□□ -1.67
Cdh11P55288 Gm23407-201ENSMUST00000082538 91 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm7676-201ENSMUST00000084055 319 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdh11P55288 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Cdh11P55288 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.64□□□□□ -1.67
Cdh11P55288 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh11P55288 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh11P55288 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm23593-201ENSMUST00000104309 120 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdh11P55288 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm13172-201ENSMUST00000118685 256 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm11965-201ENSMUST00000122017 277 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm25348-201ENSMUST00000158961 111 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm8256-201ENSMUST00000169178 453 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm29525-201ENSMUST00000189844 699 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm29523-201ENSMUST00000191415 699 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm37445-201ENSMUST00000195318 242 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm45215-201ENSMUST00000206407 395 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm44954-201ENSMUST00000208513 227 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm19256-201ENSMUST00000218550 231 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdh11P55288 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Zfp429-203ENSMUST00000224684 524 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm4963-201ENSMUST00000072718 378 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdh11P55288 Gm24207-201ENSMUST00000082781 108 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm23511-201ENSMUST00000083084 164 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Gm24917-201ENSMUST00000083935 104 ntBASIC4.63□□□□□ -1.67
Cdh11P55288 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdh11P55288 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdh11P55288 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdh11P55288 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms