Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Fdft1P53798 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.75□□□□□ -1.65
Fdft1P53798 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Fdft1P53798 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Fdft1P53798 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Fdft1P53798 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Fdft1P53798 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Fdft1P53798 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm13867-201ENSMUST00000120844 395 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm24675-201ENSMUST00000158757 259 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm28118-201ENSMUST00000185957 294 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm28097-201ENSMUST00000187333 366 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm43136-201ENSMUST00000200403 636 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm44795-201ENSMUST00000205496 319 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm19189-201ENSMUST00000221689 754 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.74□□□□□ -1.65
Fdft1P53798 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Fdft1P53798 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.74□□□□□ -1.65
Fdft1P53798 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Fdft1P53798 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Fdft1P53798 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Fdft1P53798 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm14610-201ENSMUST00000118358 966 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm14695-201ENSMUST00000121721 282 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm13232-201ENSMUST00000121816 632 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm16254-201ENSMUST00000131528 730 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.73□□□□□ -1.65
Fdft1P53798 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Fdft1P53798 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm7335-201ENSMUST00000172475 373 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm27551-201ENSMUST00000184258 77 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.73□□□□□ -1.65
Fdft1P53798 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm42990-201ENSMUST00000199231 312 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm18325-201ENSMUST00000203228 835 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm44523-201ENSMUST00000205616 417 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm4574-201ENSMUST00000207804 542 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Gm6049-201ENSMUST00000222369 458 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Fdft1P53798 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Fdft1P53798 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.73□□□□□ -1.65
Fdft1P53798 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Fdft1P53798 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Fdft1P53798 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Fdft1P53798 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms