Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.33□□□□□ -1.4
Sox1P53783 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.33□□□□□ -1.4
Sox1P53783 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Sox1P53783 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox1P53783 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox1P53783 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Sox1P53783 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox1P53783 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gm12016-201ENSMUST00000119079 681 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm12880-201ENSMUST00000120652 494 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm14678-201ENSMUST00000121396 482 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm12494-201ENSMUST00000121684 521 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.32□□□□□ -1.4
Sox1P53783 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox1P53783 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.32□□□□□ -1.4
Sox1P53783 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.32□□□□□ -1.4
Sox1P53783 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gm8403-201ENSMUST00000189712 1298 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm37493-201ENSMUST00000193167 433 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm2142-201ENSMUST00000197899 589 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm18791-201ENSMUST00000204611 726 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox1P53783 Gm19441-201ENSMUST00000221545 330 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Gm6068-201ENSMUST00000222270 387 ntBASIC6.32□□□□□ -1.4
Sox1P53783 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.32□□□□□ -1.4
Sox1P53783 AC138667.2-201ENSMUST00000224880 598 ntBASIC6.32□□□□□ -1.4
Sox1P53783 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox1P53783 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Sox1P53783 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox1P53783 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sox1P53783 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox1P53783 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.32□□□□□ -1.4
Sox1P53783 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox1P53783 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox1P53783 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox1P53783 Gm14670-201ENSMUST00000117327 337 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Zfp389-201ENSMUST00000118425 675 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm6427-201ENSMUST00000118721 979 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Defa-ps12-201ENSMUST00000122353 193 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm24940-201ENSMUST00000158326 108 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm6673-201ENSMUST00000166114 700 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox1P53783 Mir6367-201ENSMUST00000183385 102 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm29551-201ENSMUST00000190913 698 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm37243-201ENSMUST00000193407 595 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm2053-201ENSMUST00000195671 631 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm42522-201ENSMUST00000196071 255 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Gm17775-201ENSMUST00000198542 258 ntBASIC6.31□□□□□ -1.4
Sox1P53783 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox1P53783 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox1P53783 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms