Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sdc1P18828 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.92□□□□□ -1.78
Sdc1P18828 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC3.92□□□□□ -1.78
Sdc1P18828 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm9134-201ENSMUST00000193186 551 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Ighv1-35-201ENSMUST00000195265 351 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm42708-201ENSMUST00000196332 905 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm43203-201ENSMUST00000200130 558 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm44312-201ENSMUST00000203536 469 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm7890-201ENSMUST00000204877 601 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm17811-201ENSMUST00000206193 387 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 AC166358.9-201ENSMUST00000220653 375 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC3.92□□□□□ -1.78
Sdc1P18828 AC154371.1-201ENSMUST00000226600 412 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 AC163646.1-201ENSMUST00000227704 397 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sdc1P18828 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sdc1P18828 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm25139-201ENSMUST00000083247 210 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Mir375-201ENSMUST00000083682 64 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Sdc1P18828 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sdc1P18828 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sdc1P18828 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.92□□□□□ -1.78
Sdc1P18828 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm13477-201ENSMUST00000121620 2687 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Sdc1P18828 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 n-R5s178-201ENSMUST00000104249 114 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm15923-201ENSMUST00000119300 1169 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm11483-201ENSMUST00000119839 247 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm13259-201ENSMUST00000120792 456 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm8722-201ENSMUST00000121466 769 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm23171-201ENSMUST00000157159 264 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm22588-201ENSMUST00000157510 140 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm22646-201ENSMUST00000175130 115 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm24155-201ENSMUST00000175259 110 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sdc1P18828 Mir7212-201ENSMUST00000184098 61 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 AC157822.1-201ENSMUST00000196643 80 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm29745-201ENSMUST00000198005 687 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm43892-201ENSMUST00000204373 265 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm44091-201ENSMUST00000205212 649 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm19269-201ENSMUST00000211401 804 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm18487-201ENSMUST00000215826 878 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 AC148328.2-201ENSMUST00000216960 262 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 AC133650.1-201ENSMUST00000217243 578 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 AC153516.1-201ENSMUST00000217955 779 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 CT030170.4-202ENSMUST00000221109 540 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 AV026068-216ENSMUST00000223874 328 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 AC160980.2-201ENSMUST00000225131 949 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.91□□□□□ -1.78
Sdc1P18828 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sdc1P18828 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sdc1P18828 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sdc1P18828 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sdc1P18828 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sdc1P18828 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sdc1P18828 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Sdc1P18828 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms