Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.83□□□□□ -1.64
Hoxa4P06798 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hoxa4P06798 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Hoxa4P06798 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Hoxa4P06798 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hoxa4P06798 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Mir676-201ENSMUST00000102443 89 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm15297-201ENSMUST00000117795 290 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm12583-201ENSMUST00000120677 853 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm12444-201ENSMUST00000121512 877 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm23902-201ENSMUST00000157571 134 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm26310-201ENSMUST00000157766 117 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm24188-201ENSMUST00000157980 108 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm29148-201ENSMUST00000188140 336 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm9238-201ENSMUST00000196181 329 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm42663-201ENSMUST00000199883 351 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm43309-201ENSMUST00000200837 458 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm42581-201ENSMUST00000201774 966 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm44402-201ENSMUST00000203677 238 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm44237-201ENSMUST00000205183 936 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm32536-201ENSMUST00000205209 445 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Hoxa4P06798 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.82□□□□□ -1.64
Hoxa4P06798 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxa4P06798 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm25096-201ENSMUST00000104043 129 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm17046-201ENSMUST00000168078 850 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Mir6943-201ENSMUST00000185186 66 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm28097-201ENSMUST00000187333 366 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm20203-201ENSMUST00000192352 332 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm44261-201ENSMUST00000203337 209 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Supt4b-201ENSMUST00000214434 351 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm29785-201ENSMUST00000217033 383 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm25818-201ENSMUST00000083282 164 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Mir342-201ENSMUST00000083502 99 ntBASIC4.81□□□□□ -1.64
Hoxa4P06798 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.81□□□□□ -1.64
Hoxa4P06798 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxa4P06798 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxa4P06798 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxa4P06798 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Hoxa4P06798 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxa4P06798 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxa4P06798 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxa4P06798 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Hoxa4P06798 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxa4P06798 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms