Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Gm23178-201ENSMUST00000116782 95 ntBASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Gm28195-201ENSMUST00000186992 372 ntBASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Gm37088-201ENSMUST00000193887 406 ntBASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm23743-201ENSMUST00000157389 274 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Mir6391-201ENSMUST00000184391 104 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm45032-201ENSMUST00000205375 520 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm45499-201ENSMUST00000211656 280 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm19786-201ENSMUST00000222589 580 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 AC173482.3-201ENSMUST00000225492 1212 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm23099-201ENSMUST00000083454 139 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Gm43211-201ENSMUST00000196901 1899 ntBASIC5.2□□□□□ -1.58
Scn3aA2ASI5 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scn3aA2ASI5 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Rab26os-201ENSMUST00000176215 477 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm29196-201ENSMUST00000189239 618 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm19124-201ENSMUST00000191041 832 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm37030-201ENSMUST00000194254 295 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm15981-201ENSMUST00000119196 457 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm24239-201ENSMUST00000157791 255 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm27940-201ENSMUST00000184449 98 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm18181-201ENSMUST00000190670 736 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm4734-201ENSMUST00000200117 777 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm44054-201ENSMUST00000203814 372 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm44779-201ENSMUST00000206937 708 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Gm19134-201ENSMUST00000221203 487 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.19□□□□□ -1.58
Scn3aA2ASI5 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Mir711-201ENSMUST00000102188 82 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm12245-201ENSMUST00000117266 357 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm14369-201ENSMUST00000121355 285 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms