Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm37399-201ENSMUST00000195224 416 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm18702-201ENSMUST00000196923 588 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm43724-201ENSMUST00000197516 226 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm44382-201ENSMUST00000198683 122 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm31211-201ENSMUST00000199170 253 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm43054-201ENSMUST00000199495 884 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm17906-201ENSMUST00000202480 901 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm18113-201ENSMUST00000220630 303 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm9202-201ENSMUST00000223036 437 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm23330-201ENSMUST00000082660 164 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm24765-201ENSMUST00000083691 103 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.84□□□□□ -1.47
Nkx6-1Q99MA9 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Nkx6-1Q99MA9 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm11890-201ENSMUST00000119585 417 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm22452-201ENSMUST00000122804 104 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm25824-201ENSMUST00000157092 121 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm25057-201ENSMUST00000157366 88 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm22076-201ENSMUST00000158601 84 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Mir5125-201ENSMUST00000175240 79 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Mir6367-201ENSMUST00000183385 102 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Mir6951-201ENSMUST00000183910 75 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm28474-201ENSMUST00000188501 315 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm28973-201ENSMUST00000189310 613 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm37689-201ENSMUST00000193139 275 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm18997-201ENSMUST00000216353 822 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nkx6-1Q99MA9 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms