Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm12131-201ENSMUST00000117479 359 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm14943-201ENSMUST00000118056 546 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm11825-201ENSMUST00000120710 736 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm13502-201ENSMUST00000121574 684 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm24477-201ENSMUST00000157438 103 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm15795-201ENSMUST00000160969 553 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm27754-201ENSMUST00000183340 126 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm29664-201ENSMUST00000191125 463 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm35570-201ENSMUST00000198730 681 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm8672-201ENSMUST00000221200 332 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.15□□□□□ -1.42
Vps53Q8CCB4 AC168059.2-201ENSMUST00000224473 333 ntBASIC6.15□□□□□ -1.42
Vps53Q8CCB4 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.15□□□□□ -1.43
Vps53Q8CCB4 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Vps53Q8CCB4 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm42860-201ENSMUST00000196492 3991 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm44535-201ENSMUST00000208889 3136 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 H3f3c-201ENSMUST00000119459 411 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm16125-201ENSMUST00000159003 339 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm7609-204ENSMUST00000161424 461 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm21909-201ENSMUST00000178260 439 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm27315-201ENSMUST00000183977 154 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm28688-201ENSMUST00000187301 268 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm18698-201ENSMUST00000192327 668 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm17766-201ENSMUST00000209223 442 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm18541-201ENSMUST00000215935 538 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Desi2-202ENSMUST00000069568 1193 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Vps53Q8CCB4 Gm45222-201ENSMUST00000207029 4307 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm38253-201ENSMUST00000194058 4678 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm15560-201ENSMUST00000117107 643 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm11975-201ENSMUST00000118772 481 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm11877-201ENSMUST00000118921 852 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm11909-201ENSMUST00000121424 759 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm12327-201ENSMUST00000121729 1168 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm11507-201ENSMUST00000156462 412 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm22361-201ENSMUST00000158435 176 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms