Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm24989-201ENSMUST00000104461 88 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm15016-201ENSMUST00000117300 720 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm13355-201ENSMUST00000117996 317 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm14018-201ENSMUST00000119042 455 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm11794-201ENSMUST00000119446 237 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm14162-201ENSMUST00000121985 601 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm25292-201ENSMUST00000122797 322 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm25487-201ENSMUST00000158725 125 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm25243-201ENSMUST00000174912 207 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm27645-201ENSMUST00000183348 77 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm27348-201ENSMUST00000184511 170 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm20561-201ENSMUST00000188131 292 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm18969-201ENSMUST00000189423 730 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm28299-201ENSMUST00000189908 339 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm8747-201ENSMUST00000195392 751 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm5694-201ENSMUST00000195648 641 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm44161-201ENSMUST00000203532 253 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm44923-201ENSMUST00000206673 85 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm2628-201ENSMUST00000218019 426 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm19181-201ENSMUST00000218891 940 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm7045-201ENSMUST00000221466 605 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 AC137117.1-201ENSMUST00000226912 441 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim47Q8C0E3 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm38388-201ENSMUST00000195569 1430 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm22103-201ENSMUST00000116733 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm26475-201ENSMUST00000116769 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm23620-201ENSMUST00000116812 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm25042-201ENSMUST00000116856 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm25540-201ENSMUST00000116880 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm8692-201ENSMUST00000118102 438 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm12607-201ENSMUST00000120724 493 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm15618-201ENSMUST00000121610 452 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm2020-201ENSMUST00000145242 579 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm26349-201ENSMUST00000157530 130 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm23069-201ENSMUST00000158240 311 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm23550-201ENSMUST00000179003 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm25123-201ENSMUST00000179154 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm25353-201ENSMUST00000179366 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm22992-201ENSMUST00000179496 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm25892-201ENSMUST00000179867 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm24092-201ENSMUST00000180257 121 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm7745-201ENSMUST00000182235 973 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm28061-201ENSMUST00000189085 807 ntBASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim47Q8C0E3 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms