Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm38947-201ENSMUST00000209940 2720 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm23835-201ENSMUST00000104439 132 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm24594-201ENSMUST00000122502 99 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm25664-201ENSMUST00000157697 107 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm22766-201ENSMUST00000158372 99 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm24327-201ENSMUST00000175108 78 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm37272-201ENSMUST00000193401 488 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Mir142-201ENSMUST00000198092 64 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm45674-201ENSMUST00000210043 450 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim35Q8C006 AC159203.2-201ENSMUST00000221326 193 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm5457-201ENSMUST00000022260 333 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 AC167019.4-201ENSMUST00000226494 1070 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 AC139758.1-201ENSMUST00000226573 930 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm9795-201ENSMUST00000062156 693 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Trim35Q8C006 Gm5347-201ENSMUST00000210542 2327 ntBASIC8.07□□□□□ -1.12
Trim35Q8C006 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim35Q8C006 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm26344-201ENSMUST00000104553 132 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Mir743b-201ENSMUST00000104751 77 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm15426-201ENSMUST00000117823 556 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm15183-201ENSMUST00000118933 348 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm13633-201ENSMUST00000120668 898 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm11430-201ENSMUST00000121317 217 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm22349-201ENSMUST00000157864 107 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm25455-201ENSMUST00000157946 325 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm17572-201ENSMUST00000171455 420 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm25082-201ENSMUST00000177296 255 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm18828-201ENSMUST00000180475 857 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Snhg7-201ENSMUST00000181621 139 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm28303-201ENSMUST00000185642 747 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm29484-201ENSMUST00000186067 324 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm28636-201ENSMUST00000186353 696 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm28272-201ENSMUST00000189512 696 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm5575-201ENSMUST00000190879 398 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm8539-201ENSMUST00000199822 501 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm45196-201ENSMUST00000206751 825 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.06□□□□□ -1.12
Trim35Q8C006 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm29807-201ENSMUST00000220161 372 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 AC165347.1-201ENSMUST00000224089 1025 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 AC124729.1-201ENSMUST00000225327 976 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 AC164437.2-201ENSMUST00000228915 797 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm2531-201ENSMUST00000075609 512 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Gm9761-201ENSMUST00000075650 492 ntBASIC8.06□□□□□ -1.12
Trim35Q8C006 Mir30c-1-201ENSMUST00000083556 89 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms