Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm12423-201ENSMUST00000118334 135 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm14125-202ENSMUST00000120921 756 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm13460-201ENSMUST00000121274 353 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm24931-201ENSMUST00000158324 107 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm43724-201ENSMUST00000197516 226 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm45660-201ENSMUST00000210267 151 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm18924-201ENSMUST00000211929 316 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm22741-201ENSMUST00000083438 165 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.03□□□□□ -1.6
Gabpb1Q00420 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Gabpb1Q00420 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm14885-201ENSMUST00000117969 496 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 H3f3c-201ENSMUST00000119459 411 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm13738-201ENSMUST00000122437 469 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm25389-201ENSMUST00000157340 286 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm27636-201ENSMUST00000184528 122 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm21742-201ENSMUST00000189352 548 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm5842-201ENSMUST00000195073 622 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm44456-201ENSMUST00000196554 89 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm43036-201ENSMUST00000200594 373 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm44604-201ENSMUST00000205475 496 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm9512-201ENSMUST00000223112 497 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.02□□□□□ -1.61
Gabpb1Q00420 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Gabpb1Q00420 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.01□□□□□ -1.61
Gabpb1Q00420 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.01□□□□□ -1.61
Gabpb1Q00420 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm12641-201ENSMUST00000117874 985 ntBASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm11550-201ENSMUST00000118210 699 ntBASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm13118-201ENSMUST00000120402 549 ntBASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm13787-201ENSMUST00000120422 168 ntBASIC5.01□□□□□ -1.61
Gabpb1Q00420 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.01□□□□□ -1.61
Gabpb1Q00420 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms