Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm11196-201ENSMUST00000119052 395 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm13232-201ENSMUST00000121816 632 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm8993-201ENSMUST00000182182 983 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm17953-201ENSMUST00000192061 667 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm42593-201ENSMUST00000198469 377 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm18635-201ENSMUST00000199020 1060 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm46312-201ENSMUST00000220961 420 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Gm2645-201ENSMUST00000223516 547 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 AC241593.2-201ENSMUST00000225099 510 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 AC173482.3-201ENSMUST00000225492 1212 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Col18a1P39061 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.97□□□□□ -1.29
Col18a1P39061 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col18a1P39061 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Col18a1P39061 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC6.96□□□□□ -1.29
Col18a1P39061 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Col18a1P39061 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.96□□□□□ -1.29
Col18a1P39061 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.96□□□□□ -1.3
Col18a1P39061 Gm24745-201ENSMUST00000157840 85 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 Gm23116-201ENSMUST00000158481 67 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col18a1P39061 Gm18354-201ENSMUST00000173515 1068 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col18a1P39061 Gm28859-201ENSMUST00000186650 616 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC6.96□□□□□ -1.3
Col18a1P39061 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.96□□□□□ -1.3
Col18a1P39061 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 AC118639.1-204ENSMUST00000226401 694 ntBASIC6.96□□□□□ -1.3
Col18a1P39061 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col18a1P39061 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
Col18a1P39061 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col18a1P39061 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Col18a1P39061 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col18a1P39061 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col18a1P39061 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col18a1P39061 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col18a1P39061 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col18a1P39061 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.96□□□□□ -1.3
Col18a1P39061 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col18a1P39061 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col18a1P39061 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm14795-201ENSMUST00000118461 471 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm13932-201ENSMUST00000120873 610 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm22501-201ENSMUST00000158981 127 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC6.95□□□□□ -1.3
Col18a1P39061 Ear-ps10-201ENSMUST00000161871 460 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm22177-201ENSMUST00000175002 158 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm27588-201ENSMUST00000185096 263 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm2147-201ENSMUST00000193588 639 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.95□□□□□ -1.3
Col18a1P39061 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 AC074315.1-201ENSMUST00000228801 214 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.95□□□□□ -1.3
Col18a1P39061 Snora52-201ENSMUST00000082732 137 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Snord22-201ENSMUST00000083153 126 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 AC126439.1-201ENSMUST00000226772 2104 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC6.95□□□□□ -1.3
Col18a1P39061 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Col18a1P39061 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col18a1P39061 Mir467g-201ENSMUST00000116906 120 ntBASIC6.95□□□□□ -1.3
Col18a1P39061 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms