Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Col2a1P28481 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col2a1P28481 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col2a1P28481 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Col2a1P28481 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col2a1P28481 Gm14037-201ENSMUST00000120576 313 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 Gm5391-201ENSMUST00000121155 613 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.38□□□□□ -1.55
Col2a1P28481 Mir6391-201ENSMUST00000184391 104 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 Gm27805-201ENSMUST00000184513 79 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col2a1P28481 Gm42999-201ENSMUST00000198049 786 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 Gm43580-201ENSMUST00000202892 284 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col2a1P28481 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 Gm33626-201ENSMUST00000206790 828 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col2a1P28481 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col2a1P28481 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.38□□□□□ -1.55
Col2a1P28481 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 Gm15058-201ENSMUST00000117689 458 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Gm14603-201ENSMUST00000121275 448 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Gm8221-201ENSMUST00000178052 564 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 Mir7222-201ENSMUST00000183740 75 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Gm8069-201ENSMUST00000197887 154 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Gm19131-201ENSMUST00000203408 789 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Gm19134-201ENSMUST00000221203 487 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Gm6988-201ENSMUST00000222676 375 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.37□□□□□ -1.55
Col2a1P28481 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col2a1P28481 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col2a1P28481 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.37□□□□□ -1.55
Col2a1P28481 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col2a1P28481 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Gm22473-201ENSMUST00000104114 132 ntBASIC5.36□□□□□ -1.55
Col2a1P28481 Gm14304-201ENSMUST00000117272 446 ntBASIC5.36□□□□□ -1.55
Col2a1P28481 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.36□□□□□ -1.55
Col2a1P28481 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Gm29793-201ENSMUST00000202874 460 ntBASIC5.36□□□□□ -1.55
Col2a1P28481 Gm45081-201ENSMUST00000206281 572 ntBASIC5.36□□□□□ -1.55
Col2a1P28481 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.36□□□□□ -1.55
Col2a1P28481 Gm45209-201ENSMUST00000207122 353 ntBASIC5.36□□□□□ -1.55
Col2a1P28481 Gm3338-201ENSMUST00000220982 269 ntBASIC5.36□□□□□ -1.55
Col2a1P28481 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col2a1P28481 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col2a1P28481 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col2a1P28481 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col2a1P28481 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col2a1P28481 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Col2a1P28481 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.35□□□□□ -1.55
Col2a1P28481 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col2a1P28481 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col2a1P28481 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col2a1P28481 Gm7363-201ENSMUST00000119883 399 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 Gm13232-201ENSMUST00000121816 632 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col2a1P28481 Gm3084-201ENSMUST00000169967 598 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.35□□□□□ -1.55
Col2a1P28481 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col2a1P28481 Gm8861-201ENSMUST00000196346 832 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 Gm42694-201ENSMUST00000196951 358 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 Gm21461-201ENSMUST00000200382 863 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 Gm45392-201ENSMUST00000210441 214 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 Gm7368-201ENSMUST00000213307 367 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.35□□□□□ -1.55
Col2a1P28481 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.35□□□□□ -1.55
Col2a1P28481 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms