Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm26079-201ENSMUST00000104066 133 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Rnu11-201ENSMUST00000104135 134 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm14870-201ENSMUST00000118414 156 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm11472-201ENSMUST00000121305 556 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm11438-201ENSMUST00000121582 189 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd9P28357 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm18808-201ENSMUST00000173316 462 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm25675-201ENSMUST00000174979 118 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm20656-201ENSMUST00000176925 518 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm26556-201ENSMUST00000180645 320 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm4832-201ENSMUST00000182679 399 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm27402-201ENSMUST00000183890 120 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm28257-201ENSMUST00000185244 463 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm37743-201ENSMUST00000194645 376 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm43160-201ENSMUST00000196453 421 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm9560-201ENSMUST00000205012 1201 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm4556-201ENSMUST00000217808 355 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd9P28357 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd9P28357 Gm9496-201ENSMUST00000191295 1601 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm22284-201ENSMUST00000104132 132 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm8534-201ENSMUST00000118553 766 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm14835-201ENSMUST00000119039 315 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm13222-201ENSMUST00000119638 138 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm22236-201ENSMUST00000157093 106 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm16102-201ENSMUST00000160955 420 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Fth-ps2-201ENSMUST00000168364 516 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm6632-201ENSMUST00000168425 954 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm24810-201ENSMUST00000175317 70 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm25874-201ENSMUST00000178030 79 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm21978-201ENSMUST00000179696 377 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm37603-201ENSMUST00000192368 219 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm37164-201ENSMUST00000192809 637 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm37746-201ENSMUST00000193249 198 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.17□□□□□ -1.42
Hoxd9P28357 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm43083-201ENSMUST00000199594 476 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC6.17□□□□□ -1.42
Hoxd9P28357 Gm5324-201ENSMUST00000208115 476 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms