Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm20287-201ENSMUST00000172848 2367 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Sdc1P18828 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.93□□□□□ -1.78
Sdc1P18828 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Sdc1P18828 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm45517-201ENSMUST00000209973 2468 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Sdc1P18828 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC3.93□□□□□ -1.78
Sdc1P18828 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm11877-201ENSMUST00000118921 852 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Gm14991-201ENSMUST00000119913 598 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Gm12752-201ENSMUST00000121657 811 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC3.93□□□□□ -1.78
Sdc1P18828 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC3.93□□□□□ -1.78
Sdc1P18828 Snora81-201ENSMUST00000157310 178 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Gm22378-201ENSMUST00000157481 111 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm8256-201ENSMUST00000169178 453 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm28640-201ENSMUST00000190918 550 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm9442-201ENSMUST00000194242 319 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Gm36954-201ENSMUST00000195362 363 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Gm42539-201ENSMUST00000197009 308 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC3.93□□□□□ -1.78
Sdc1P18828 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm33242-201ENSMUST00000212130 1057 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 AC118733.1-201ENSMUST00000217387 1217 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 AC163621.1-201ENSMUST00000220695 379 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Olfr151-202ENSMUST00000221099 929 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm18620-201ENSMUST00000222295 324 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 CT009515.3-201ENSMUST00000226509 671 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 AC154436.2-201ENSMUST00000227408 208 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 AC116724.1-201ENSMUST00000227900 972 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.93□□□□□ -1.78
Sdc1P18828 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Sdc1P18828 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm8526-201ENSMUST00000079153 475 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Gm23677-201ENSMUST00000083156 104 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Sdc1P18828 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Sdc1P18828 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Sdc1P18828 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Sdc1P18828 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.93□□□□□ -1.78
Sdc1P18828 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm14854-201ENSMUST00000117758 841 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm5381-201ENSMUST00000117975 1250 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm12311-201ENSMUST00000118803 374 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm13677-201ENSMUST00000120739 595 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm14977-201ENSMUST00000121626 812 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm12893-201ENSMUST00000121732 275 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm15227-201ENSMUST00000121844 399 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm26347-201ENSMUST00000157526 131 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm23496-201ENSMUST00000157741 248 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm23280-201ENSMUST00000157905 139 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm16114-201ENSMUST00000161930 300 ntBASIC3.92□□□□□ -1.78
Sdc1P18828 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sdc1P18828 Gm8183-201ENSMUST00000183134 980 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms