Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm22637-201ENSMUST00000158144 283 ntBASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Gm20614-201ENSMUST00000177106 632 ntBASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Gm37030-201ENSMUST00000194254 295 ntBASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Gm45081-201ENSMUST00000206281 572 ntBASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 AC156832.3-201ENSMUST00000215591 435 ntBASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Gm37764-201ENSMUST00000194664 2150 ntBASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc180J3QNE4 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Gm37780-201ENSMUST00000194117 1873 ntBASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Gm13000-201ENSMUST00000120937 496 ntBASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Gm43441-201ENSMUST00000201458 205 ntBASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Gm43781-201ENSMUST00000197634 2681 ntBASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc180J3QNE4 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm14303-201ENSMUST00000121320 171 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 AC154788.1-201ENSMUST00000225003 340 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 AL589696.1-201ENSMUST00000225711 330 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm37060-201ENSMUST00000194997 2397 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm37558-201ENSMUST00000193684 2983 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm22367-201ENSMUST00000178930 132 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm44474-201ENSMUST00000196525 127 ntBASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Ccdc180J3QNE4 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 AC122317.3-201ENSMUST00000219320 3524 ntBASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Gm42478-201ENSMUST00000199252 1467 ntBASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Gm12704-201ENSMUST00000119789 464 ntBASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Gm19898-201ENSMUST00000177490 251 ntBASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC8.68□□□□□ -1.02
Ccdc180J3QNE4 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Naip3-201ENSMUST00000118082 4208 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm12189-201ENSMUST00000119779 912 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm13484-201ENSMUST00000120738 412 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm14908-201ENSMUST00000120930 1286 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm4134-201ENSMUST00000173244 563 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm22119-201ENSMUST00000175594 99 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 AC156798.1-201ENSMUST00000220508 224 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 CT009765.2-201ENSMUST00000221331 392 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Gm37356-201ENSMUST00000193362 1613 ntBASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ccdc180J3QNE4 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm37268-201ENSMUST00000192254 2614 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm11510-201ENSMUST00000120278 347 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm44485-201ENSMUST00000199569 137 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm4734-201ENSMUST00000200117 777 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm44582-201ENSMUST00000209125 445 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm9616-201ENSMUST00000221154 781 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm37488-201ENSMUST00000195434 3374 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms