Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm12370-201ENSMUST00000117809 604 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm14771-201ENSMUST00000118249 203 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm12937-201ENSMUST00000118333 448 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm14158-201ENSMUST00000118409 308 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm14835-201ENSMUST00000119039 315 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm14620-201ENSMUST00000120656 383 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm11321-201ENSMUST00000121257 902 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm12399-201ENSMUST00000121475 446 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm25451-201ENSMUST00000177832 121 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm2092-201ENSMUST00000178887 639 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm2759-201ENSMUST00000179938 639 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Mir6992-201ENSMUST00000183342 109 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm38234-201ENSMUST00000195204 421 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm43856-201ENSMUST00000197004 369 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm43344-201ENSMUST00000198723 1229 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm5034-201ENSMUST00000199115 634 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm43892-201ENSMUST00000204373 265 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm44277-201ENSMUST00000205128 649 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm44795-201ENSMUST00000205496 319 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm7624-201ENSMUST00000209702 435 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 LOC665443-201ENSMUST00000212284 796 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 AL929417.1-201ENSMUST00000214901 124 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 AC159380.1-201ENSMUST00000218096 121 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 AC119573.1-201ENSMUST00000227960 757 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm5830-201ENSMUST00000049117 443 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm5341-201ENSMUST00000058881 489 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm16335-201ENSMUST00000077495 309 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Mir375-201ENSMUST00000083682 64 ntBASIC6.65□□□□□ -1.34
Clp1Q99LI9 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clp1Q99LI9 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.65□□□□□ -1.35
Clp1Q99LI9 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Gm45160-201ENSMUST00000207112 3099 ntBASIC6.65□□□□□ -1.35
Clp1Q99LI9 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
Clp1Q99LI9 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.65□□□□□ -1.35
Clp1Q99LI9 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.65□□□□□ -1.35
Clp1Q99LI9 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.64□□□□□ -1.35
Clp1Q99LI9 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Gm14197-201ENSMUST00000117480 1049 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Gm6541-201ENSMUST00000165542 561 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Clp1Q99LI9 Mir5125-201ENSMUST00000175240 79 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Gm22132-201ENSMUST00000175316 100 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Gm24897-201ENSMUST00000179033 107 ntBASIC6.64□□□□□ -1.35
Clp1Q99LI9 Gm28116-201ENSMUST00000189064 387 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms