Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Pcdhb3Q91XZ7 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm15913-201ENSMUST00000118492 331 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm9697-201ENSMUST00000147052 997 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm23639-201ENSMUST00000175078 132 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm22716-201ENSMUST00000177596 107 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm25194-201ENSMUST00000177987 79 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm27401-201ENSMUST00000184052 173 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm27385-201ENSMUST00000184747 104 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm27458-201ENSMUST00000185108 121 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm21856-201ENSMUST00000187547 696 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm29470-201ENSMUST00000188007 696 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm28952-201ENSMUST00000189285 681 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm18849-201ENSMUST00000189861 560 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm18403-201ENSMUST00000192907 529 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm19739-201ENSMUST00000195941 153 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm9504-201ENSMUST00000196322 468 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm45319-201ENSMUST00000210220 318 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 AC152415.1-201ENSMUST00000213320 440 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm7731-201ENSMUST00000091759 470 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.95□□□□□ -1.3
Pcdhb3Q91XZ7 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm11219-201ENSMUST00000118565 358 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm15106-201ENSMUST00000119691 821 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm12833-201ENSMUST00000136112 477 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm24422-201ENSMUST00000157800 119 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Mir1981-201ENSMUST00000157934 82 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm6489-201ENSMUST00000178167 696 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm23191-201ENSMUST00000179147 107 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm21430-201ENSMUST00000182998 998 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC6.94□□□□□ -1.3
Pcdhb3Q91XZ7 Gm18117-201ENSMUST00000187720 742 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms